PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_002291-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 461aa    MW: 50861 Da    PI: 6.8422
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_002291-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.51.2e-08277325355
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  NNU_002291-RA 277 NSHSLAERVRREKISERMRFLQDLVPGC----NKVTGKAGMLDEIINYVQSLQ 325
                    58*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.59E-17272342IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.03E-10272329No hitNo description
PROSITE profilePS5088815.307274324IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.5E-17275342IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.2E-6277325IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.0E-9280330IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    Send to blast
MGADDNGDLG FQQRCGSLLN CPSSGMYVPE KVVGMTASSM SMSKSSNVVD SFFPSPWDPF  60
VSQAQNVEFQ VSSIVSPHQI TTSTYGVGML ENRGVSPHLV QFPSDPNLVD LAPKLPCFGS  120
GSFSDMVSSL GLPDCDQIVN ADCLDYPSSN KEGDTEKTAS STNGAIHARV FQEDQQDDGA  180
GGPSPNGKKR KRVPENHSQF DTSQGQSLEA EQQKDLSQKT LDGANEQDEK KQKNEQNPGA  240
NSRGKVTGKQ AKDRSQNGDA PKEDYIHVRA RRGQATNSHS LAERVRREKI SERMRFLQDL  300
VPGCNKVTGK AGMLDEIINY VQSLQRQVEF LSMKLATVNP ELNINMERFL SKDVNASFTR  360
WQFKYSWICS RNELLFSTTA HNSITGCLAS SPGYKSTVNP HSSGKTNELL YLPFLSFVHQ  420
SLIIEPSGYR YPVHGMMSFK VLSNWASFLT QLWTILVIMV A
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010273618.10.0PREDICTED: transcription factor bHLH74-like isoform X1
SwissprotQ6NKN94e-61BH074_ARATH; Transcription factor bHLH74
SwissprotQ9CAA91e-60BH049_ARATH; Transcription factor bHLH49
TrEMBLE0CNY11e-129E0CNY1_VITVI; Putative uncharacterized protein
STRINGVIT_18s0001g08600.t011e-128(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.32e-62bHLH family protein